Deployment failure / pakage version conflict

November 22, 2019 @tonyfujs Tony

@tonyfujs wrote:

Hello,

I am trying to deploy a Shiny app on our RstudioConnect server, but the deployment fails with the following error:

Package ‘tibble’ version 1.4.2 cannot be unloaded:
Error in unloadNamespace(package) : namespace ‘tibble’ is imported by ‘ggplot2’, ‘dplyr’ so cannot be unloaded

Not exactly sure where this conflict comes from, since my local version of tibble is 2.1.3

sessionInfo()
R version 3.5.1 (2018-07-02)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 17134)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] shiny_1.4.0         ggplot2_3.2.1       tidyr_1.0.0         dplyr_0.8.3         flextable_0.5.6    
 [6] formattable_0.2.0.1 reshape_0.8.8       shinythemes_1.1.2   matrixStats_0.55.0  nleqslv_3.3.2      

loaded via a namespace (and not attached):
 [1] tidyselect_0.2.5  xfun_0.11         purrr_0.3.3       colorspace_1.4-1  vctrs_0.2.0       htmltools_0.4.0  
 [7] base64enc_0.1-3   rlang_0.4.1       later_1.0.0       pillar_1.4.2      withr_2.1.2       glue_1.3.1       
[13] gdtools_0.2.1     uuid_0.1-2        lifecycle_0.1.0   plyr_1.8.4        munsell_0.5.0     gtable_0.3.0     
[19] zip_2.0.4         htmlwidgets_1.5.1 evaluate_0.14     knitr_1.26        fastmap_1.0.1     httpuv_1.5.2     
[25] curl_4.2          Rcpp_1.0.3        xtable_1.8-4      scales_1.1.0      openssl_1.4.1     promises_1.1.0   
[31] backports_1.1.5   jsonlite_1.6      mime_0.7          systemfonts_0.1.1 askpass_1.1       packrat_0.5.0    
[37] digest_0.6.22     tools_3.5.1       magrittr_1.5      lazyeval_0.2.2    tibble_2.1.3      crayon_1.3.4     
[43] pkgconfig_2.0.3   zeallot_0.1.0     rsconnect_0.8.15  data.table_1.12.6 xml2_1.2.2        assertthat_0.2.1 
[49] rmarkdown_1.17    officer_0.3.6     rstudioapi_0.10   R6_2.4.1          compiler_3.5.1   
> 

Below is the list of libraries used in the Shiny app:

library(nleqslv)
library(matrixStats)
library(shinythemes)
library(grid)
library(reshape)
library(formattable)
library(flextable)
library(dplyr)
library(tidyr)
library(ggplot2)
library(shiny)

This seems related to the following closed issues:
https://community.rstudio.com/t/conflicting-packages/14158
https://community.rstudio.com/t/problem-in-installing-foreign-package-to-read-spss-files/37620
https://community.rstudio.com/t/unable-to-unload-rcpp-version-0-12-12/5768

Thanks!

Posts: 2

Participants: 2

Read full topic

Previous Article
SAML 2.0 With Shiny Server Pro
SAML 2.0 With Shiny Server Pro

@chetanm wrote: SAML 2.0 seems to be added for R studio connect ( https://blog....

Next Article
Securing Plumber on Kubernetes
Securing Plumber on Kubernetes

@Hong wrote: Just wondering if anyone has code/examples of how to create an auth...